BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039E10LP1|AL430720
(956 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig961 1086 0.0
3x_Contig806 488 e-137
>3x_Contig961
Length = 4343
Score = 1086 bits (548), Expect = 0.0
Identities = 572/580 (98%)
Strand = Plus / Minus
Query: 377 agagtgcaattgttaaaaagttgttcatggtaacgaatgaatgcgtacgaattgttaaaa 436
||||||||||||| ||||| |||||||||| |||||||||||||||||||||| ||||
Sbjct: 4343 agagtgcaattgtgaaaaaagtgttcatggtttcgaatgaatgcgtacgaattgtgaaaa 4284
Query: 437 acgatgcttgtgtttgaatcaatgtgaataaaatttacggttaggacgaattcacgtgct 496
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4283 acgatgtttgtgtttgaatcaatgtgaataaaatttacggttaggacgaattcacgtgct 4224
Query: 497 ttgtagatttcgatagtacattggataaacctaaagtatatatatgatataacgatattg 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4223 ttgtagatttcgatagtacattggataaacctaaagtatatatatgatataacgatattg 4164
Query: 557 taagataaacagaaaatgacgagaagcagaagataataaacaataaggggaccaaaatca 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4163 taagataaacagaaaatgacgagaagcagaagataataaacaataaggggaccaaaatca 4104
Query: 617 gaaaagaggatgatcaatcagtgttatccactaatgtgcatgattaaagatattttattg 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4103 gaaaagaggatgatcaatcagtgttatccactaatgtgcatgattaaagatattttattg 4044
Query: 677 ataattcttattcgaaatccctttattttcgcttcagttttcatgtagatatgttgtcat 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4043 ataattcttattcgaaatccctttattttcgcttcagttttcatgtagatatgttgtcat 3984
Query: 737 tgtcactggtacgaatgaagaatttgatgcggttcccgagtatgtttattatgttctttt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3983 tgtcactggtacgaatgaagaatttgatgcggttcccgagtatgtttattatgttctttt 3924
Query: 797 cattcaatgatctcgatgcaaaaatcgagggttttttgaactgatatccgaagaaaattg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3923 cattcaatgatctcgatgcaaaaatcgagggttttttgaactgatatccgaaggaaattg 3864
Query: 857 agtttgtggtttaattaatttcgagtctcgtttcgttatctgtcattcctaccctcttgc 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3863 agtttgtggtttaattaatttcgagtctcgtttcgttatctgtcattcctaccctcttgc 3804
Query: 917 aatgtttctgtgtaggtttttttttcttataattcgttcg 956
||||||||||||||||||||||||||||||||||||||||
Sbjct: 3803 aatgtttctgtgtaggtttttttttcttataattcgttcg 3764
>3x_Contig806
Length = 2480
Score = 488 bits (246), Expect = e-137
Identities = 256/258 (99%), Gaps = 1/258 (0%)
Strand = Plus / Plus
Query: 1 aacactagatagctttgaaattggatacatcaaatcctattgaaagagtcggtccagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2222 aacactagatagctttgaaattggatacatcaaatcctattgaaagagtcggtccagtga 2281
Query: 61 gaatttcaaaatcatcatcgaagctcagaacaggaaaaagctagaaattactgtaaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2282 gaatttcaaaatcatcatcgaagctcagaacaggaaaaagctagaaattactgtaaaagg 2341
Query: 121 aaaactagaaaagaaagaaaaatcccaggaggaagtgagctttctttctattttg-ggaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2342 aaaactagaaaagaaagaaaaatcccaggaggaagtgagctttctttctattttgcggaa 2401
Query: 180 atatatatagttttgtccggtcggattgcagatgtctcgtgtgatgtctgggtgttgttt 239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2402 atatatatatttttgtccggtcggattgcagatgtctcgtgtgatgtctgggtgttgttt 2461
Query: 240 tatttcaaatgaatcgtt 257
||||||||||||||||||
Sbjct: 2462 tatttcaaatgaatcgtt 2479
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,325
Number of Sequences: 1807
Number of extensions: 10325
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 2
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)